Computational Mass Spectrometry @ Pacific Northwest National Laboratory's repositories
DB-Schema-Export-Tool
Exports SQL Server and Postgres database objects as schema files. Exported objects include tables, views, stored procedures, and functions, plus also database properties including database roles and logins. The program can also export table data to create SQL files with an Insert Into statement for each row.
protein-coverage-summarizer
Computes the percent of the residues in each protein sequence that have been identified, based on a list of identified peptides. A graphical user interface (GUI) is provided to allow the user to select the input files, set the options, and browse the coverage results.
Protein-Digestion-Simulator
Performs validation, transformation, and in-silico digestion of text files containing protein or peptide sequences (FASTA format or delimited text)
DBSchema_DMS
PRISM Data Management System database schema
DBSchema_PgSQL_DMS
PRISM Data Management System PostgreSQL database schema
DMS-Analysis-Manager
DMS Analysis Tool Manager
MyEMSL-MTS-File-Cache-Manager
MTS manager for retrieving files from MyEMSL
SQLServer-Stored-Procedure-Converter
Converts SQL Server stored procedures to PostgreSQL compatible stored procedures
DMS-Capture-Task-Manager
DMS Capture Task Manager
DMS-Website
DMS Website
Checksum-Generator
Computes MD5 and SHA-1 checksums for files matching the file mask. Results are written to a tab-delimited text file.
Data-Import-Manager
DataImportManager (DIM)
DataPackage-Archive-Manager
DataPackage Archive Manager
DLL-Version-Inspector
This program inspects a .NET DLL or .Exe to determine the version. This allows a 32-bit .NET application to call this program via the command prompt to determine the version of a 64-bit DLL or Exe.
DMS-EMail-Manager
DMS EMail Manager
DMS-Instrument-Directory-Scanner
Instrument directory scanner
DMS-Model-Config-Db-Updater
Updates column names in the SQLite files used by the DMS website to retrieve data from the DMS database and display it for users
DMS-Organism-Database-Handler
Organism Database (FASTA file) programs, including PRISMSeq Uploader and the FastaFileMaker console application
DMS-Program-Runner-Service
DMS Program Runner Service
DMS-Space-Manager
DMS Space Manager
DMS-Update-Manager
DMS Update Manager
Package_Folder_Create_Manager
Creates a new storage folder for newly created data packages
Parameter-File-Editor
DLL for retrieving parameter files from DMS
PgSQL-Procedure-List-Updater
Processes a PostgreSQL DDL file with procedure or function creation statements and updates each procedure or function found using a file created by the DB Schema Export Tool
PgSQL-Table-Creator-Helper
Uses a map file to update column names in a SQL DDL file with Create Index statements
PgSQL-View-Creator-Helper
Uses a map file to update table and column names in a SQL DDL file with Create View statements
PPMErrorCharter
Utility for generating plots of the mass measurement errors before and after processing with mzRefinery
SQL-File-Splitter
Splits a PostgreSQL DDL file into multiple files
Status-Message-DB-Updater
Reads manager status messages from an ActiveMQ server and push them into the DMS database.