This repository includes several software utilities for working with Protein Collections stored in PRISM, the Proteomics Research Information and Management System.
| Program | Exe or DLL | Description |
|---|---|---|
| Protein Collection Editor | PRISMSeq Uploader.exe | GUI application for importing FASTA files into the Protein_Sequences database (to create protein collections) |
| Fasta File Maker | FastaFileMaker_Exe.exe | Console application for exporting one or more protein collections to create a FASTA file |
| Protein Exporter library | Protein_Exporter.dll | Used by the Analysis Tool Manager and by FastaFileMaker to export protein collections to create a FASTA file |
Written by Ken Auberry and Matthew Monroe for the Department of Energy (PNNL, Richland, WA)
E-mail: proteomics@pnnl.gov
Website: https://github.com/PNNL-Comp-Mass-Spec/ or https://www.pnnl.gov/integrative-omics
The Organism Database Handler is licensed under the Apache License, Version 2.0; you may not use this file except in compliance with the License. You may obtain a copy of the License at https://opensource.org/licenses/Apache-2.0