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"Representation Learning of Genomic Sequence Motifs with Convolutional Neural Networks" by Peter K. Koo and Sean R. Eddy

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PPR Motif Annotation using Neural Network

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PPR Motif Identification using Neural Network

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pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks

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a framework for training sequence-level deep learning networks

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sRNA miner enables identification of potential RBP footprints, or other clusters of small RNAs, in organelles.

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