Lifang He's repositories
GWAS-BCCAD
Analysis Pipelines to replicatet the analysis of: Genome-Wide Association Study of Brain Connectivity Changes for Alzheimer’s Disease
awesome-ehr-deeplearning
Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.
Brain-Tumor-Segmentation-1
Attention-Guided Version of 2D UNet for Automatic Brain Tumor Segmentation
comp
Code for complementary-label learning.
confidentlearning-reproduce
Official data release to reproduce Confident Learning paper results
deep-graph-matching-consensus
Implementation of Deep Graph Matching Consensus in PyTorch
deeplearning-biology
A list of deep learning implementations in biology
DLTK
Deep Learning Toolkit for Medical Image Analysis
ETNet
ETNet: Error Transition Network for Arbitrary Style Transfer (NeurIPS 2019)
federated-learning
Related material on Federated Learning
gae
Implementation of Graph Auto-Encoders in TensorFlow
kover
Learn interpretable computational phenotyping models from k-merized genomic data
mci-to-ad-review
paper review on predicting mild cognitive impairment to alzheimer's disease conversion (MCI-to-AD) (Aug, 2019)
Medical-image-registration-Resources
Medical image registration related books, tutorials, papers, datasets, toolboxes and deep learning open source codes
mica-deep-mcca
Deep Multiset Canonical Correlation Analysis - An extension of CCA to multiple datasets
notears
DAGs with NO TEARS: Continuous Optimization for Structure Learning
NRI
Neural relational inference for interacting systems - pytorch
ProgressiveGAN3D
Progressive Growing of GANs for Improved Quality, Stability, and Variation
PyTorch-GAN
PyTorch implementations of Generative Adversarial Networks.
Region-Growing
Region growing segmentation algorithm using python
retinal-vessel-segmentation-with-rotation-augmentation
The code for paper "DATA AUGMENTATION IS MORE IMPORTANT THAN MODEL ARCHITECTURES FOR RETINAL VESSEL SEGMENTATION " We utilize the retina-unet "https://github.com/orobix/retina-unet" as the basic code, but we change a lot of code and add the rotation augmentation ,which achieves the good result AUC 0.9814.
SAGPool
Official PyTorch Implementation of SAGPool - ICML 2019
Spine-Landmark-Detection
Spine Vertebrae Landmark Detection
Tutorial-Medical-Image-Registration
Medical Image Registration
V-Net
Implementation of V-Net in TensorFlow for medical image segmentation.
Vertebra-Landmark-Detection
[ISBI 2020] Vertebra-Focused Landmark Detection for Scoliosis Assessment