Cristal Villalba's repositories
fantastic_databases_and_where_to_find_them
Repository of databases for omic data
oncogenic-pathways-and-MPS
A systems biology work to discover drugs in common both in cancer and MPS diseases
ruichenlabcodes
Single cell ATAC and RNA seq data analysis
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
balaio-de-scripts
Here we found a lot of codes XD
cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
dropkick
Automated cell filtering for single-cell RNA sequencing data
gr8monk3ys
The following is the Readme that is presented in the front of my profile
GSVA
Gene set variation analysis
OSCA
The package wrapping the book, for deployment via the Bioconductor build system.
potencia-feminina-git-e-github
repositorio do curso ministrado para o projeto potencia feminina
project-jeanli-rohansanghani-mariamortari
project-jeanli-rohansanghani-mariamortari created by GitHub Classroom
ruichenlabcodes-signac
R toolkit for the analysis of single-cell chromatin data
scanpy
Single-cell analysis in Python. Scales to >1M cells.
sicelore
Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanopore long read sequencing data.
single-cell-best-practices
This project is work in progress! https://www.sc-best-practices.org
spatialdata-plot
Static plotting for spatialdata
STAR
RNA-seq aligner