Cristal Villalba's repositories
2017.06.23-q2-fungal-tutorial
A quick fungal ITS analysis tutorial for QIIME 2
ALD_Modifier_Project
This repository houses scripts for analysis and plotting of the ALD Modifier Project headed by Clara van Karnebeek
BestPractices
A Brief Summary Of Best Practices For Bioinformatics
bms038_analysis
Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for manuscript https://doi.org/10.1016/j.cell.2017.09.028 See also http://www.ioexplorer.org for interactive visuallization
ClinTAD
A tool for analyzing copy number variants (CNVs) in the context of topologically associated domains (TADs).
DE_analysis
Scripts to run differential expression analysis using DESeq2 package
gep2pep
Gene Expression Profiles to Pathway Expression Profiles conversion and analysis
github-paper
Plos in Computational Biology paper related with github for researchers, code, source and document
improve16SIonTorrent
Scripts for 16S analysis from Ion Torrent data
Learning-From-Data-A-Short-Course
Solutions to the exercises and problems in the book: Learn From Data_A Short Course by Yaser Abu-Mostafa, Malik Magdon-Ismail and Hsuan-Tien Lin
MBatch
Superseded by https://github.com/MD-Anderson-Bioinformatics/BatchEffectsPackage
Perl-tutorial
Learning Perl
picwoodpecker
perl Tk program to choose among photos and copy one or more modified copy
pythonnobrasil
🐍🇧🇷📅 Eventos Python no Brasil
ReactionMiner
Tool to predict (bio)chemical reactions using graph mining.
REMP
Github repository for REMP
target
target: An R Package to Predict Combined Function of Transcription Factors
TEtranscripts
A package for including transposable elements in differential enrichment analysis of sequencing datasets.
Web-Science
Faz a raspagem de algumas informações referente ao tema de busca e em seguida analisa esses dados.