JuliaEpi / Mathepia.jl

Spatial and temporal epidemiology data mining flow tools including data processing and analysis, model setup and simulation, inference and evaluation. Focusing on state-of-the-art methods such as universal differential equations, epidemiology-informed deep learning methods.

Mathepia

Mathepia.jl is composed of the following four main packages:

• MathepiaModels.jl: Epidemic spatial and temporal model setup and simulation. Focusing on state of the art epidemiology models such as universal differential equations, epidemiology-informed deep learning models.
• MathepiaData.jl: Spatial and temporal data preprocessing and analysis
• MathepiaInference.jl: Bayesian inference tools.
• MathepiaOptimal.jl: Optimization, optimal control and optimal transport tools

Mathepia.jl is designed to build an ecosystem of spatial and temporal data mining with mathematical epidemiology as a main application. It is at very beginning stage.