Joao Santinha's repositories
Medical_Image_Analysis_Workshop
Workshop on Medical Image Analysis using pydicom, SimpleITK, ITK, itkwidgets, numpy, seaborn, and matplotlib
SIIM21_BIP
SIIM 2021 Hands-On Sessionn on Basics of Imaging Processing
streamlit-leaderboard
Make simple competition leaderboard using streamlit in one file of code
Label_of_Physical_Point_Medical_Image
Python script that given a list of physical coordinates and a segmentation mask returns the corresponding labels of those coordinates
collageradiomics
Python Implementation of the CoLlAGe radiomics descriptor. CoLlAGe captures subtle anisotropic differences in disease pathologies by measuring entropy of co-occurrences of voxel-level gradient orientations on imaging computed within a local neighborhood.
ICPSurv
Invariant Causal Prediction for Survival Data
itk-vtk-viewer
2D / 3D web image, mesh, and point set viewer using itk.js and vtk.js
joaosantinha.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
lightning-hydra-template
Deep Learning project template best practices with Pytorch Lightning, Hydra, Tensorboard.
MagiciansCorner
Notebooks, datasets, other content for the Radiology:AI series known as Magicians Corner by Brad Erickson
PhantomStudy
A multicenter study on radiomic features from T2-weighted images of a customized MR pelvic phantom setting the basis for robust radiomic models in clinics
pytorch-cnn-visualizations
Pytorch implementation of convolutional neural network visualization techniques
SlicerNotebooks
Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python