JaerongA's repositories
aeon_mecha
Project Aeon's main library for interfacing with acquired data. Contains modules for file io, data querying and qc.
workflow-array-ephys
Example DataJoint workflow of `element-array-ephys` - NIH U24
element-array-ephys
DataJoint Element for Neuropixels analysis with Kilosort
AudioGPT
AudioGPT: Understanding and Generating Speech, Music, Sound, and Talking Head
bark
🔊 Text-Prompted Generative Audio Model
brainreg
Automated 3D brain registration with support for multiple species and atlases.
CommonDataModel
Definition and DDLs for the OMOP Common Data Model (CDM)
cookiecutter-data-science
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.
datajoint-matlab
Relational data pipelines for the science lab
datajoint-python
Relational data pipelines for the science lab
datajoint-tutorials
Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples
dbgate
Database manager for MySQL, PostgreSQL, SQL Server, MongoDB, SQLite and others. Runs under Windows, Linux, Mac or as web application
element-event
DataJoint Element for event-based behavior experiments
element-interface
Common functions for the DataJoint Elements
intanrhdreader
Python reader for .rhd data files
intanrhsreader
Python reader for .rhs data files
nipype
Workflows and interfaces for neuroimaging packages
OpenDevin
🐚 OpenDevin: Code Less, Make More
pandas-ai
Pandas AI is a Python library that integrates generative artificial intelligence capabilities into Pandas, making dataframes conversational
pharus
Pharus is a generic REST API server backend for DataJoint pipelines built on top of flask, datajoint, and pyjwt.
probeinterface
Python package to handle probe layout, geometry and wiring to device.
prophet
Tool for producing high quality forecasts for time series data that has multiple seasonality with linear or non-linear growth.
pynapple
PYthon Neural Analysis Package :pineapple:
rosettasciio
Python library for reading and writing scientific data format
spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
spyglass
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
the-algorithm-ml
Source code for Twitter's Recommendation Algorithm