JaerongA's starred repositories
DataQualityDashboard
A tool to help improve data quality standards in observational data science.
PCORnet2OMOP_ETL_tool
This is an ETL tool for converting PCORnet CDM into OMOP CDM
AI-Scientist
The AI Scientist: Towards Fully Automated Open-Ended Scientific Discovery 🧑🔬
Vocabulary-v5.0
Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.
CommonDataModel
Definition and DDLs for the OMOP Common Data Model (CDM)
fastplotlib
Next-gen fast plotting library running on WGPU using the pygfx rendering engine
netneurotools
Useful tools from the Network Neuroscience Lab
openscope_databook
OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈
cloudbeaver
Cloud Database Manager
data-engineer-handbook
This is a repo with links to everything you'd ever want to learn about data engineering
rosettasciio
Python library for reading and writing scientific data format
multitaper
Multitaper codes translated into Python.
bids-validator
Validator for the Brain Imaging Data Structure
erplab
ERPLAB Toolbox is a free, open-source Matlab package for analyzing ERP data. It is tightly integrated with EEGLAB Toolbox, extending EEGLAB’s capabilities to provide robust, industrial-strength tools for ERP processing, visualization, and analysis. A graphical user interface makes it easy for beginners to learn, and Matlab scripting provides enormous power for intermediate and advanced users.
hMRI-toolbox
A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
cnn-ripple
CNN-ripple is a 1D convolutional neural network (CNN) operating over high-density LFP recordings to detect hippocampal SWR both offline and online.
bids-starter-kit
Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets