Irenexzwen

3D-genome-gitbook

An ebook- introduction of Genome Interaction

BIOE183

gginteract

Interaction plot between two transcript based on ggplot2

MUSIC-docker

176-Shortreads-aligner

CS176 finaly project, fast shortreads aligner using BWA

about

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

Applied-Genomic-Technologies

atom

:atom: The hackable text editor

awesome-rshiny

An awesome R-shiny list!

SingleCellAnalysisFunc

include daily use function for single cell analysis and plots

BENG183

Lecture materials

CHM13

Ultra-long reads for CHM13 genome assembly

csvtk

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

d2l-pytorch

This project reproduces the book Dive Into Deep Learning (www.d2l.ai), adapting the code from MXNet into PyTorch.

HiC_tools

A collection of tools for Hi-C data analysis

moRandi

Morandi color palette for R plot

MUSIC-Snakemake

MUSIC-tools

numpy-ml

Machine learning, in numpy

oneliners

Useful bash one-liners for bioinformatics.

OnlinePCA.jl

Online Principal Component Analysis

RNA-seq-analysis

RNAseq analysis notes from Ming Tang

SARS-Human-DERank

Search of important human genes for viral infection

scRNA-seq-analysis

seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang

Snakemake_ChIPseq_PE

Pipeline for the analysis of PE ChIP-seq data

styles

Official repository for Citation Style Language (CSL) citation styles.

test_wiki

TRAPeS

TCR Reconstruction Algorithm for Paired-End Single cell

universalmotif

Motif manipulation functions for R.