Irenexzwen

3D_genome_newgitbook

SigRec

Compressed sensing scheme for single cell expression profile recovery

bamsplit

Split a BAM file by haplotype support

CIDR-examples

Examples relating to the CIDR package.

circos-tutorial

A learner's note for circos

CS-SMAF

dip-c

Tools to analyze Dip-C (or other 3C/Hi-C) data

EE227

fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting...)

Genomic-Interactive-Visualization-Engine

Genomic Interactive Visualization Engine

incubator-echarts

A powerful, interactive charting and visualization library for browser

magenta

Magenta: Music and Art Generation with Machine Intelligence

manim

Animation engine for explanatory math videos

MantelTest

Efficient Python implementation of the Mantel test, a significance test of the correlation between two distance matrices

Microbial-Interkingdom-Suppl

Scripts and tables for Duran & Thiergart et al. 2018 (unpublished)

MultiRunner

This is a python package for multi-process running.

oneliners

Useful bash one-liners for bioinformatics.

scVI

A deep generative model for gene expression profiles from single-cell RNA sequencing

ultisnips

UltiSnips - The ultimate snippet solution for Vim. Send pull requests to SirVer/ultisnips!

welcome_tutorials

Various tutorials given for welcoming new students at MILA.