FNNDSC / BCH

pman

A process management system written in python

pypx-repack-codecarbon-datalad

Comparing energy efficiency of a Rust rewrite of a program for DICOM management.

pl-fetal-surface-extract

Inner cortical plate surface extraction using CIVET

python-poetry

Container images for poetry

chrisomatic

Setup ChRIS with plugins and powerpointlessness.

chrs

ChRIS CLI client in Rust

tinycudann-docker-build

aiochris

ChRIS python client built on aiohttp

cfs

ChRIS File System -- CFS

chris_plugin

Python ChRIS plugin SDK

ep-surface_fit_parameterized

A ChRIS plugin for assessing parameters for surface_fit

facilities_resources

Equipment and Facilities/Resources Documentation suitable for NIH grant submissions

files-backend-benchmark

hplocons-wine

Run HPLOCONS in a container using Podman or Docker.

khris-helm

ChRIS backend on Kubernetes

microminc

Minimize container image of CIVET + MINC tools

NeSVoR

NeSVoR is a package for GPU-accelerated slice-to-volume reconstruction.

pfbridge

`pfbridge` acts as a thin relay between a (typically) clinical client and a ChRIS-workflow-control-service (typically `pflink`)

pfmisc

Misc python modules used by many of the FNNDSC projects

pftree

A class that constructs a dictionary representation of paths/files in a filesystem

pl-abs

A ChRIS plugin to take the absolute value of numbers

pl-dylld

pl-dyworkflow

Separate a parent node into multiple siblings and add the same workflow to each child.

pl-medcon

A DS plugin to convert NIfTI input to DICOM output

pl-mgz2imageslices

A ChRIS plugin to convert `mgz` to `png` or `jpeg` which will also be useful in other project workflows

pl-nii2mnc

nii2mnc ChRIS ds plugin, unsigned byte

pl-nums2mask

Binarize a classification volume to obtain a mask

pl-smoothness-error

Calculate vertex-wise smoothness error of a .obj surface mesh

pl-surfigures

Quality control figures for MNI surfaces and vertex-wise data

plugin2cube

A simple app that "registers" a plugin to a CUBE instance directly from the CLI