Bio2Byte's repositories
public_notebooks
Repository of Jupyter Notebooks created by the Bio2Byte group
simsapiper
A Nextflow pipeline that creates reliable, structure-informed MSAs of thousands of protein sequences which can supplement structural information from online resources automatically
bio2byte-mdutils
Templates and analysis scripts for MD simulations of post-translationally modified peptides
Scop3P-notebooks
Jupyter notebook examples of SCOP3P REST API services
bio2byte-peptidebuilder
A simple Python library to generate model peptides (incl. capping groups and modified residues)
bioconda-recipes
Conda recipes for the bioconda channel.
bioenvada
A nextflow pipeline to investigate protein adaption to environmental conditions
constava
Constava analyzes conformational ensembles calculating conformational state propensities and conformational state variability.
nf-pipelines
In this repository we store our shared Nextflow pipelines
pdb-topology-viewer
PDB Topology Viewer
tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
usegalaxy-eu-tools
List of tools included in https://usegalaxy.eu