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Antoine Passemiers (AntoinePassemiers)

AntoinePassemiers

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Company:ESAT/STADIUS, KULeuven

Location:Belgium

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Antoine Passemiers's repositories

ArchMM

A Cython Machine Learning library dedicated to Hidden Markov Models

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Stochastic-Unit-Commitment

Stochastic Unit Commitment for Renewable Energy Supply using Lagrangian Decomposition

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Encoder-Forest

eForest: Reversible mapping between high-dimensional data and path rule identifiers using trees embedding

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Lexicon-Based-Sentiment-Analysis

Lexicon-based sentiment analysis inspired by Syuzhet R package

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Realistic-Mouse

Realistic mouse movements for building click bots

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Scythe

Deep learning library based on the gcForest algorithm

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Beyond-Gradient-Descent

Minimalist deep learning library with first and second-order optimization algorithms made for educational purpose

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Cythrinsic

Header files for allowing Intel intrinsics in Cython

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PFSP-WT

Heuristic solver based on Ant Colony Optimization and designed for the Permutation Flow Shop Scheduling Problem with Weighted Tardiness (PFSP-WT)

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PORTIA-Manuscript

Source code for the paper "Fast and Accurate Inference of Gene Regulatory Networks through Robust Precision Matrix Estimation", by Passemiers et al.

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MMO-Torch

Matrix Manifold Optimization with PyTorch

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Cython-Project-Template

Ready-to-use and simple Cython template for long-term projects (with NumPy support)

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Oriana

Variational Inference library for Probabilistic Count Matrix Factorization (pCMF) and single-cell expression data analysis

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Master-Thesis

Master Thesis on Protein Contact Prediction

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MKP

Heuristic Solver for the Multidimensional Knapsack Problem

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Recursive-Least-Squares-Algorithm-With-Kafka-And-Spark

Remote repository for the INFO-H-515 Big data project (phase 2)

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Wasserstein-Mass-Spectrometry

Unofficial implementation of the paper "The Wasserstein Distance as a Dissimilarity Measure for Mass Spectra with Application to Spectral Deconvolution"

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Wynona

Protein Residue Contact Prediction based on a Deep Neural Architecture

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GDE-GaussFold

Lightning-Fast Template-free Protein Folding based on Predicted Residue Contacts and Secondary Structure

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PORTIA

A Lightning-fast algorithm for Gene Regulatory Network inference from gene expression data

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NIH-EEG

[Kaggle] HMM-based application for predicting seizures from intracranial EEG recordings

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Open-Challenges-Single-Cell-Perturbations

20th solution for Kaggle's competition "Open Problems – Single-Cell Perturbations"

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P-Center-Problem

Solving P-Center Problem using P1 and P3 formulations

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AntoinePassemiers

Config files for my GitHub profile.

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Bitonic-Sort

Sorting arbitrary sequences using a bitonic sort algorithm distributed with MPI

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celfie

cfDNA cell type of origin estimation

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ChIP-seq-Peak-Caller

Peak Calling algorithm for Chromatin-immunoprecipitation sequencing (ChIP-seq) data

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Feature-Selection-Benchmark

Official source code for the paper "How good are neural network feature selection methods in detecting non-linear signals? A quantitative benchmark."

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GRADIS

Assessing the robustness of the results presented in "Supervised learning of gene regulatory networks based on graph distance profile of transcriptomics data"

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Jerry-The-Race-Car-Driver

He drives so goddamn fast!

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