AntoinePassemiers / Oriana

Variational Inference library for Probabilistic Count Matrix Factorization (pCMF) and single-cell expression data analysis

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Oriana

Non-official implementation of the paper "Probabilistic Count Matrix Factorization for Single Cell Expression Data Analysis" by Durif et al.

Installation

From the parent folder, install the library by typing the following command:

$ sudo python setup.py install

Dependencies

  • numpy
  • scipy

About

Variational Inference library for Probabilistic Count Matrix Factorization (pCMF) and single-cell expression data analysis


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