Al3n70rn's repositories
bioawk
BWK awk modified for biological data
000
Language:R000
lgg-cnv
Integrative analysis of copy number and transcriptome in Low-Grade Gliomas(Brain Tumor)
Language:R000
rDiff
Tests for Differential RNA Isoform Expression
GPL-3.0000
rna-seq-diff-exprn
RNA-Sequencing data differential expression analysis pipeline. Performs: genome coverage (via bedtools and HTSeq), generates Circos code and plots, differential expression (via DESeq and NOISeq), structural variant detection (e.g. fusion genes, via SVDetect) and differential exon usage (via DEXSeq).
stuartlab-circleplotter-py
python tool for drawing CircleMap images
Language:Python000
viewFusion
View fusion event by circos plot
Language:Perl000