Accio

AMIDD

Introduction to Applied Mathematics and Informatics in Drug Discovery (AMIDD)

KEGGgraph

The KEGGgraph package to parse KEGG pathways in R into graph objects

BioQC

Detect tissue heterogeneity in gene expression data with BioQC

causal_drug_discovery

Causal inference with Python and R

MCBDD

Mathematical and Computational Biology in Drug Discovery

bactopia

A flexible pipeline for complete analysis of bacterial genomes

python-intermediate-inflammation

Python intermediate course: inflammation

2021-01-word-count

An instance of the word-count template provided by CodeRefinery

2023-06-Ben-Schnuppern

2023-07-collider

A simple example of collider's bias

2023-11-Zukunftstag-2023

Zukunftstag 2023

2024-01-GGG-PythonAtLibrary

Entwurf, Übungen, und Materielien für die Veranstaltung Python@Library im GGG Stadtbibliothek Basel, Januar 2024

2024-02-good-data-pay-compound-interests

A plot showing the point

2024-02-PK-parameters-visualized

2024-02-Roche-Schullabor-Experio

2024-03-From-Novel-Targets-To-Novel-Therapeutics

Lecture on mechanistic, statistical, and causal modelling in drug discovery for Master Program Drug Sciences

accio.github.io

Jitao David Zhang's blog

acciopy

A python package for matching lists of strings approximately

AMBER

Automated Modelling for Biological Evidence-based Research

blitzgsea

Fast GSEA implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for accurate p-value estimation.

causal_salad_2021

One day course on causal inference, MPI-EVA 9 September 2021

CV

CV

designit

Blocking and randomization for experimental design

distsysbook

The book Distributed systems: for fun and profit

dowhy

DoWhy is a Python library for causal inference that supports explicit modeling and testing of causal assumptions. DoWhy is based on a unified language for causal inference, combining causal graphical models and potential outcomes frameworks.

genetic_support

Refining the impact of genetic evidence on clinical success

hepatitisB

HBV build

learnpy

Scripts and notebooks to learn python

neuromatch-course-content

NMA Computational Neuroscience course

PMDA-summer-schoo-2022-Team-1-RanForrest

Team 1 (Amir, Antonio, Martina, and Selen)