Jitao David Zhang's repositories
qiaseq-singlecell-rna
processing single cell QIAseq UPX RNA reads
BioQC-example
The BioQC algorithm applied to a real expression profiling dataset
2018-10-mixedEffectsModels
A tutorial for mixed effects models and their applications in bioinformatics and computational biology in drug discovery
Four-Weeks-Bioinformatics
Four Weeks Bioinformatics
2017-11-pythonPackaging
A minimalistic example of a python package
basic_simulation_training
A document for the Living Journal of Computational Molecular Science (LiveCoMS) which describes basic training for molecular simulations (oriented towards molecular dynamics (MD)), providing some training itself and linking out to other helpful information elsewhere. The intent is that this provide information on the prerequisites which will be required for understanding/following many of the other "best practices" documents being prepared.
bookdown
Authoring Books and Technical Documents with R Markdown
chinese-xinhua
:orange_book: 中华新华字典数据库。包括歇后语，成语，词语，汉字。
Chinese_OCR_CNN-RNN-CTC
中文手写汉字识别
d3examples
Examples of interactive graphics using d3.js
Fibor
generating Fibonacci numbers
GEOminer
GEO data download and parsing
gsa-v0.2
Gene set analysis: benchmark study with simulated and real-life data
InseyWinseySpider
Analysis of the game Insey Winsey Spider by Orchard Toys
learn-scipy
Scripts to learn script
LearnRcpp
Learning notes on the Rcpp package and its derivatives
multijoin
The multijoin tool to join multiple files containing key-value pairs into a matrix
pcaExplorer
pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
presentation_git-from-the-inside
Presentation slides for my "git from the inside" talk.
Probabilistic-Programming-and-Bayesian-Methods-for-Hackers
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
program-math-for-fun
Program math for fun!
ribiosScript-debug
Examples to debug ribios scripts
rosalind
Codes and files to solve the bioinformatics problems posted on the Rosalind platform
SimilarCharactor
对常用的6700个汉字进行音、形比较，输出音近字、形近字的列表。
Transfer
File transfer
Vennerable
Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries. It allows the display of area-weighted Venn diagrams and allows fine graphical control over the result.