Accio / BioQC

Detect tissue heterogeneity in gene expression data with BioQC

http://accio.github.io/BioQC/

Accio/BioQC Issues

subsetting a non-existant signature should return an error?
Closed 2 years ago2
MultiQC module for BioQC
Updated 3 years ago
Command-line script for BioQC
Updated 3 years ago
include `valType=c("r", "f")` into documentation
Closed 3 years ago
SignedGenesets gives `NaN`s for `valType %in% c("r", "f")`
Updated 3 years ago4
Update default gmt file to the latest version
Closed 3 years ago1
Use of BioQC package to compute Shannon entropy on transcriptomic data
Updated 3 years ago
U value inverted?
Closed 4 years ago3
Error when running
Closed 4 years ago1
names(GmtList) will remove names
Closed 5 years ago1
Update BioQC on Bioconductor to the latest version.
Closed 5 years ago
Problem with gmt files importet from broadinstitute
Closed 7 years ago1
BioQC::gini cannot handle negative values
Closed 7 years ago1
Check issues
Closed 7 years ago1
BioQC::gini should address NA properly
Closed 7 years ago1
When running BioQC on an expression set, take only rows with gene symbol as background.
Updated 7 years ago2
wmwTest does not accept default value for simplify with datatypes ("matrix" , "indexList")
Updated 8 years ago
wmwTest does not accept default value for simplify with datatypes ("matrix" , "indexList")
Closed 8 years ago
Readme should link to github pages
Closed 8 years ago
Update author list in Supplementary docs.
Closed 8 years ago
Sentence describing performance in documentation does not make sense.
Closed 8 years ago1