Peichen Zhong's starred repositories

atomistic-simulation-tutorial

Atomistic simulation hands on tutorial on Matlantis

Language:Jupyter NotebookLicense:CC-BY-4.0Stargazers:25Issues:0Issues:0

ChatDrug

LLM for Drug Editing, ICLR 2024

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Catalyst.jl

Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.

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hoomd-blue

Molecular dynamics and Monte Carlo soft matter simulation on GPUs.

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MOFFUSION

Multi-modal conditioning diffusion model for MOFs generation

Language:Jupyter NotebookLicense:MITStargazers:5Issues:0Issues:0
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care

Automated creation and manipulation of Chemical Reaction Networks (CRNs) in heterogeneous catalysis, allowing the fast estimation of the network energy profile with GAME-Net-UQ, an uncertainty quantification-based DFT-trained graph neural network.

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GeoLDM

Geometric Latent Diffusion Models for 3D Molecule Generation

Language:PythonLicense:MITStargazers:180Issues:0Issues:0

coeffnet

Equivariant network to predict activation barriers and molecular orbitals through coefficients of molecular orbitals.

Language:PythonLicense:MITStargazers:4Issues:0Issues:0

alchemical-mlip

Alchemical machine learning interatomic potentials

Language:Jupyter NotebookLicense:MITStargazers:11Issues:0Issues:0

bamboo

BAMBOO (Bytedance AI Molecular BOOster) is an AI-driven machine learning force field designed for precise and efficient electrolyte simulations.

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pymatviz

A toolkit for visualizations in materials informatics.

Language:PythonLicense:MITStargazers:144Issues:0Issues:0

quests

Quick Uncertainty and Entropy via STructural Similarity

Language:PythonLicense:BSD-3-ClauseStargazers:27Issues:0Issues:0

efficient-kan

An efficient pure-PyTorch implementation of Kolmogorov-Arnold Network (KAN).

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pyEQL

A Python library for solution chemistry

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pykan

Kolmogorov Arnold Networks

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pyscf

Python module for quantum chemistry

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Gaunt-Tensor-Product

[ICLR 2024 Spotlight] Official Implementation of "Enabling Efficient Equivariant Operations in the Fourier Basis via Gaunt Tensor Products"

License:Apache-2.0Stargazers:53Issues:0Issues:0

CASMcode

First-principles statistical mechanical software for the study of multi-component crystalline solids

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openmm-torch

OpenMM plugin to define forces with neural networks

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diffusion-conformer

Diffusion-based molecule conformer generation

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allegro

Allegro is an open-source code for building highly scalable and accurate equivariant deep learning interatomic potentials

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Graph-U-Nets

Pytorch implementation of Graph U-Nets (ICML19)

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jax-fem

Differentiable Finite Element Method with JAX

Language:PythonLicense:GPL-3.0Stargazers:203Issues:0Issues:0

denoising-diffusion-pytorch

Implementation of Denoising Diffusion Probabilistic Model in Pytorch

Language:PythonLicense:MITStargazers:7580Issues:0Issues:0

AI2BMD

AI-powered ab initio biomolecular dynamics simulation

License:MITStargazers:148Issues:0Issues:0