XiaZhao (zhaoxia413)

zhaoxia413

Geek Repo

Company:Third Military Medical University

Location:Chongqing

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XiaZhao's repositories

amplicon

Statistics and visualization for amplicon data

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circlator

A tool to circularize genome assemblies

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fastq-pair

Match up paired end fastq files quickly and efficiently.

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Groningen-Microbiome

Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groningen

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JAMS_BW

Just a Microbiology System (JAMS) - a suite for analyzing microbiological sequencing data for use on NIH HPC systems (Biowulf)

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jekyll-uno-timeline

A Jekyll Theme, based on the Uno-Theme with some adjustments.

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matplotlib

matplotlib: plotting with Python

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Microbiome-1

Microbiome research

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MicrobiomeStatPlot

Interpretation and visualization of microbiome charts

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neatseq-flow

A Lightweight Software for Efficient Execution of High Throughput Sequencing Workflows

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nf_TUMA

Tumor microbiome analysis

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panphlan

PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples

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pgcgap

The Prokaryotic Genomics and Comparative Genomics Analysis Pipeline

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pyani

Application and Python module for average nucleotide identity analyses of microbes.

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rgi

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

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SpiecEasi

Sparse InversE Covariance estimation for Ecological Association and Statistical Inference

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survminer

Survival Analysis and Visualization

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tidyMicro

tidyMicro GitHup Repository

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Virulence_Factor_Characterization

Virulence Factor Characterization in Metagenomes

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