zhangwenda0518

zhangwenda's repositories

Chromosome_evolution_Lepidoptera_MS

Scripts associated with 'Chromosome Evolution in Lepidoptera' manuscript

Language:RMIT100

fasta_windows

A Rust implementation of sliding window stats over fastas.

MIT100

We often encounter some software download methods change or the original website does not exist. This brings a lot of troubles to our subsequent analysis. So this warehouse will collect those old but usefully software. Welcome to supplement and consult.

GPL-3.01 10

Plant_Annotation_TEs

Methods and recipes for Plant Genome Annotation - Transposable Elements

Language:Perl100

postitve_selection_scripts

Scripts used for calculating positive selection in ortholg clusters of genes

Language:Perl100

zhangwenda.github.io

my blogs

Language:CSS010

Administrative-divisions-of-China

中华人民共和国行政区划：省级（省份）、地级（城市）、县级（区县）、乡级（乡镇街道）、村级（村委会居委会），**省市区镇村二级三级四级五级联动地址数据。

Language:JavaScriptWTFPL000

allele_frequencies

calculate allele frequencies from mpileup format

Language:PerlMIT000

AlleleFinder

AlleleFinder is a tool for identifying allele genes from polyploid genome.

Language:Python000

ArmywormGenome

Code for the armymorm genome project https://onlinelibrary.wiley.com/doi/10.1111/1755-0998.13809

CC0-1.0000

catfish-genome

Pipelines, code and ressources for creating a fully haplotype-resolved T2T assembly of the African catfish (Clarias gariepinus) combining PacBio HiFi, ONT long reads and Hi-C data.

000

chicken-T2T

Scripts that used in our chicken T2T manuscript.

MIT000

Genome-annotation-pipeline

Genome annotation pipeline

Language:Perl000

gfanno

Gene Family Annotation Workflow

Apache-2.0000

GoogleTranslateIpCheck

MIT000

Icca

We propose a novel method that is able to identify and fill the gaps in the chromosome-level assembly by recalling the sequences in the lost small contigs.

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