Zac Swider's repositories
opticalFlow
Scripts for interactively visualizing and batch quantifying the optical flow of image sequences
waveAnalysis
Python tools for batch analysis of oscillatory dynamics
AOC2022
Advent of Code 2022
cellpose3
Zac's fork on cellpose for custom changes of hard coded values
keyboard-shortcuts
Backup of Dygma layers and Karabiner-Elements shortcuts
microfilm2
Zac's fork of microfilm for creating figures and animations for multi-channel images with a focus on microscopy.
napari-annotation
package description
napari_scripts
Collection of useful (to me) python scripts for interacting with napari
temporal-derivative-plots
Interactive Matplotlib interface to visualize the relative contributions of spatially separated signal loss and signal gain to the overall signal in the field of view
volume-distribution
A semi-automated pipeline for filtering 3D segmentations, and measuring the relative orientation of cells and spindles in 3D space.
routine_image_kit
Routine image processing and visualization utilities
zacswider.github.io
A little bit about me and my background.