yyoshiaki / VIRTUS

A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.

https://github.com/yyoshiaki/VIRTUS/wiki

yyoshiaki/VIRTUS Issues

singularity mode
Updated 4 months ago
Parallel processing
Updated 7 months ago1
Difficulty with using wrapper for viral gene counts
Closed a year ago1
How to run wrapper with specific single virus
Closed a year ago1
Question about Input
Closed a year ago1
Cluster methods used by VIRTUS and heatmap issue
Updated a year ago1
TypeError: Passing a set as an indexer is not supported. Use a list instead.
Closed a year ago1
EXITING because of FATAL ERROR: could not create output file: ...virtus143/Log.out Check if the path ... exists and you have permissions to write there
Updated a year ago1
createindex.job.yaml url_virus should be corrected
Closed 4 years ago2
create index failed
Updated 2 years ago10
salmon quant issues
Updated 3 years ago1
Tool definition failed validation error when running createindex_singlevirus.cwl
Updated 3 years ago7
How to change location of output temporary directory from root to home partition?
Closed 3 years ago
ERROR Tool definition failed validation
Closed 3 years ago15
Does the --no-container work?
Closed 4 years ago1
docker tag should be latest
Closed 4 years ago1
pandas error when parsing a virus-less file
Updated 4 years ago
test error
Closed 4 years ago8
STAR --genomeSAindexNbases setting
Closed 4 years ago3
Installation Issue
Closed 4 years ago1
index building
Closed 4 years ago4