Suggestion with environment
smttsp opened this issue · comments
Hi there,
I wanted to use your repo in my project and I realized that you are using python 3.7.
To my experience, Apple M1/M2 machines have problems with python <3.9. Also, since it is python 3.7, I had a lot of other issues, like library not found etc (not sure if it is my system or general problem). But a lot of dependencies are outdated and most likely some will start to get deprecated/not supported soon.
So, I updated your environment.yml file little bit and once the installation was completed, I exported the new yml file. (added txt at the extension now to be able to upload it to git)
The other issue is that python setup.py install is deprecated. Instead I used pip install .
I tested the new environment on Mac M2, it works fine. I am pretty sure it should be fine in other OSs too. But it is better to test.
Hi @smttsp , thank you for your suggestions! Though I am using Apple M1 and haven't had such issues, I will add this yml as a pointer in the readme in case more people have similar issues.
Hi all, I was only able to install using the environment file provided by @smttsp.
However, I noticed that @smttsp environment file has redmax-py listed as a pip dependency, which will lead to conda failing to create the environment. Since redmax-py gets installed by running
cd simulation
pip install .
I assume @smttsp generated the environment.yml after running pip install ..
If you remove redmax-py from the pip dependencies in environment2.yml, it should work out of the box. Alternatively, you can replace redmax-py in the pip dependencies with ./simulation. Then you can skip the cd simulation ... step, because pip will do it for you during conda env create .... It should look something like this:
name: assembly3_11
channels:
- conda-forge
- defaults
dependencies:
- black=23.11.0
- bzip2=1.0.8
- ca-certificates=2023.11.17
- click=8.1.7
- libcxx=16.0.6
- libexpat=2.5.0
- libffi=3.4.2
- libsqlite=3.44.2
- libzlib=1.2.13
- mypy_extensions=1.0.0
- ncurses=6.4
- openssl=3.2.0
- packaging=23.2
- pathspec=0.12.1
- pip=23.3.2
- platformdirs=4.1.0
- python=3.11.7
- python_abi=3.11
- readline=8.2
- ruff=0.1.8
- setuptools=68.2.2
- sqlite=3.44.2
- tk=8.6.13
- tzdata=2023c
- wheel=0.42.0
- xz=5.2.6
- zlib=1.2.13
- pip:
- asttokens==2.4.1
- backcall==0.2.0
- certifi==2023.11.17
- charset-normalizer==3.3.2
- cloudpickle==3.0.0
- contourpy==1.2.0
- cycler==0.12.1
- cython==3.0.7
- decorator==5.1.1
- executing==2.0.1
- fonttools==4.47.0
- gym==0.26.2
- gym-notices==0.0.8
- idna==3.6
- importlib-metadata==7.0.0
- ipython==8.18.1
- jedi==0.19.1
- joblib==1.3.2
- kiwisolver==1.4.5
- matplotlib==3.8.2
- matplotlib-inline==0.1.6
- networkx==3.2.1
- numpy==1.26.2
- parso==0.8.3
- pexpect==4.9.0
- pickleshare==0.7.5
- pillow==10.1.0
- prompt-toolkit==3.0.43
- ptyprocess==0.7.0
- pure-eval==0.2.2
- pyglet==2.0.10
- pygments==2.17.2
- pyparsing==3.1.1
- pyquaternion==0.9.9
- python-dateutil==2.8.2
- python-fcl==0.7.0.5
# - redmax-py==0.0.1
- ./simulation
- requests==2.31.0
- rtree==1.1.0
- scikit-learn==1.3.2
- scipy==1.11.4
- six==1.16.0
- sortedcontainers==2.4.0
- stack-data==0.6.3
- threadpoolctl==3.2.0
- tqdm==4.66.1
- traitlets==5.14.0
- trimesh==4.0.7
- typing-extensions==4.9.0
- urllib3==2.1.0
- wcwidth==0.2.12
- zipp==3.17.0
Hey @DusGor,
Yes, good catch! It seems I forgot to delete the redmax-py from the environment2.yml file after generating it.
Here is an updated environment2.yml.txt as @DusGor recommended. This should be sufficient for installation
Don't you get a ton of porting errors using 3.11 and all the dependency changes? Do you just fix them as you go?