yjzhang

matplotlib-venn

Area-weighted venn-diagrams for Python/matplotlib

deepxde

A library for scientific machine learning and physics-informed learning

pybobyqa

Python-based Derivative-Free Optimization with Bound Constraints

cookiecutter

A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.

CellReprogramming

StructuralIdentifiability.jl

Fast and automatic structural identifiability software for ODE systems

nevergrad

A Python toolbox for performing gradient-free optimization

Stone-Soup

A software project to provide the target tracking community with a framework for the development and testing of tracking algorithms.

filterpy

Python Kalman filtering and optimal estimation library. Implements Kalman filter, particle filter, Extended Kalman filter, Unscented Kalman filter, g-h (alpha-beta), least squares, H Infinity, smoothers, and more. Has companion book 'Kalman and Bayesian Filters in Python'.

Kalman-and-Bayesian-Filters-in-Python

Kalman Filter book using Jupyter Notebook. Focuses on building intuition and experience, not formal proofs. Includes Kalman filters,extended Kalman filters, unscented Kalman filters, particle filters, and more. All exercises include solutions.

sktime

A unified framework for machine learning with time series

pyPESTO

python Parameter EStimation TOolbox

papermill

📚 Parameterize, execute, and analyze notebooks

diffeqpy

Solving differential equations in Python using DifferentialEquations.jl and the SciML Scientific Machine Learning organization

PERCEPTION

Utilizing single-cell omics from patients tumor to predict response and resistance.

OT-scOmics

This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in between single-cell omics data.

KG_predict_DrugResponse

polars

Dataframes powered by a multithreaded, vectorized query engine, written in Rust

altair

Declarative statistical visualization library for Python

ready

A cross-platform implementation of various reaction-diffusion systems and PDEs.

sbi

Simulation-based inference toolkit

BNMPy

panorama-view

Add-on for Firefox letting you organize tabs and tab groups visually

p5.js

p5.js is a client-side JS platform that empowers artists, designers, students, and anyone to learn to code and express themselves creatively on the web. It is based on the core principles of Processing. http://twitter.com/p5xjs —

drawio

draw.io is a JavaScript, client-side editor for general diagramming.

drawio-desktop

Official electron build of draw.io

plotnine

A Grammar of Graphics for Python

mediKanren

Proof-of-concept for reasoning over the SemMedDB knowledge base, using miniKanren + heuristics + indexing.

Cloud-Free-Tier-Comparison

Comparing the free tier offers of the major cloud providers like AWS, Azure, GCP, Oracle etc.

darling

Darwin/macOS emulation layer for Linux