yhao-compbio

yhao-compbio

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yhao-compbio's repositories

DTox

Develop a knowledge-guided neural network model along with an interpretation framework

Language:ShellLicense:GPL-3.0Stargazers:7Issues:4Issues:1

target

analyze the biological connections between targets and drug toxicity

Language:RLicense:GPL-3.0Stargazers:2Issues:1Issues:0
Language:ShellLicense:GPL-3.0Stargazers:1Issues:1Issues:0

tox_data

Collect datasets for computational toxicology

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chemical

Collect and process structure data of chemical compounds

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connectivity-search-manuscript

Manuscript describing Hetnet Connectivity Search

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drugbank

User-friendly extensions of the DrugBank database

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ExPecto

predicting expression effects of human genome variants ab initio from sequence

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hetmech

Prototyping DWPC p-values for detecting hetnet connectivity

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:0Issues:0Issues:0

ontology

Collect and process data of pathway ontologies

Language:ShellLicense:GPL-3.0Stargazers:0Issues:0Issues:0

TTox

Develop and evaluate a feature selection pipeline for the identification of toxicity targets

Language:ShellLicense:GPL-3.0Stargazers:0Issues:1Issues:0