Yax Che's repositories
bluebert
BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).
graph-server
proofreading server
fastapi-django
FastAPI with Django ORM
kogito-travel-agency-tutorial
Kogito based travel agency service
kogito-runtimes
Runtimes for Kogito
FxTextEditor
A monospaced text editor which supports very large text models (WORK IN PROGRESS).
cbioportal
cBioPortal for Cancer Genomics
d3kit
D3Kit is a set tools to speed D3 related project development
gitignore
A collection of useful .gitignore templates
dephell
:package: :fire: Python project management. Manage packages: convert between formats, lock, install, resolve, isolate, test, build graph, show outdated, audit. Manage venvs, build package, bump version.
PPI-typed-relation-extractor
Relation extraction for protein to protein interactions to extraction strongly typed PPI relations.. My research topic.. So work in progress
lit
The Language Interpretability Tool: Interactively analyze NLP models for model understanding in an extensible and framework agnostic interface.
keycloak-containers
Docker image for Keycloak project
controlsfx
Custom controls for JavaFX
ppmd
A Performance-Portable Framework For Atomistic Simulations
Ab3P
Abbreviation definition dection library trained on PubMed abstracts
jem-video
A companion wiki + code repository for the O'Reilly Media video "Just Enough Math". This site provides additional links, sample code, and other addenda.
molstar
A comprehensive macromolecular library
RichTextFX
Rich-text area for JavaFX
quarkus-vertx-chat
Rudimentary messaging application showcasing Quarkus, Vert.x, Reactive Streams and server-sent events (SSE)
quarkus-reactive-rest
Quarkus with reactive REST services - not using Server sent events.
ADRtarget
Machine learning guided association of adverse drug reactions with in vitro off-target pharmacology
client-samples
Client samples to run with Gluon Client plugins for Maven and Gradle
followme.fx
Sample afterburner.fx project
Networks
Network and Graph Algorithms From Scratch
python-project-blueprint
Blueprint/Boilerplate For Python Projects
ncbitax2lin
🐞 Convert NCBI taxonomy dump into lineages