xmc811 / Scillus

R Package for Single-Cell Dataset Processing and Visualization

xmc811/Scillus Issues

Numbers for clusters and white bar separation in plot_heatmap
Updated 3 months ago1
Update to work with Seurat V5 data structure and to work with SCTransform'd objects
Updated 4 months ago2
Issue with large heatmaps and cairo
Updated 4 months ago2
plot_measure_dim error
Updated 6 months ago3
Order of enrichment in the gsea plot
Updated a year ago
Scale.data not found in Seurat object
Updated a year ago3
Unique barcode
Updated 2 years ago2
plot_GSEA did not pop up
Updated 2 years ago
Change the font size and the size of the legend
Updated 2 years ago
[Feature]
Updated 2 years ago
Heatmap cluster separation lines[Feature]
Updated 2 years ago
[Feature]
Updated 3 years ago1
pass the reduction to plot_scdata?
Updated 3 years ago
Failed to create Cairo backend!
Updated 3 years ago
use metadata (or active ident) in plot_stat
Updated 3 years ago2
Suggestion to add a function to plot proportions normalized by group count
Updated 3 years ago
add gene annotation for Heatmap
Updated 3 years ago1
problem with plot_measure
Updated 3 years ago11
negative values of -log10(Adj. p)
Closed 3 years ago2
[Bug]
Closed 3 years ago3
Extend markers argument for list - plot_heatmap[Feature]
Closed 3 years ago
Decrease height of column annotation
Closed 3 years ago2
Display legend top annotation the same way as in Seurat
Closed 3 years ago4
Support of more colors than possible with RColorBrewer[Feature]
Closed 3 years ago1
elements in `col` should be named vectors
Closed 3 years ago7
How to change fonts size for markers genes in plot_heatmap?
Closed 3 years ago1
[Feature]
Closed 3 years ago1
[Bug] plot_stat levels not factored
Closed 5 years ago1