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Yannick Wurm research lab @ QMUL & Turing (wurmlab)

Yannick Wurm research lab @ QMUL & Turing

wurmlab

Geek Repo

Ants, bees, evolutionary genomics & bioinformatics.

Location:Queen Mary University of London

Home Page:https://wurmlab.com

Twitter:@yannick__

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Yannick Wurm research lab @ QMUL & Turing's repositories

sequenceserver

Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)

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genomicscourse

For QMUL's Genome Bioinformatics MSc module BIO721P & SIB's Spring school in bioinfo & population genomics

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wurmlab.github.io

Wurm lab website

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genevalidator

GeneValidator: Identify problems with predicted genes

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SBC361-programming-in-R

QMUL's programming in R course

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flo

Same species annotation lift over pipeline.

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Fire_ant_viral_load

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2022-amel_bter_expression_nachrs

Comparative expression analysis of nAChR subunit genes in Apis mellifera and Bombus terrestris

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crowdCheckingTableOfContents

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haplodiploid_simulations

SLiM simulations of haplodiploid populations

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2021-fire-ant-social-supergene-introgression

Introgression events analysis of Solenopsis sp. supergene.

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CompareGenomeQualities

Reference free comparison of genome assemblies

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to_allmaps

Scripts to use RADseq, RNAseq, and BioNano data with ALLMAPS for chromosomal scaffolding of genome assemblies.

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genevalidatorapp

A web wrapper for GeneValidator

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2019-11-allelic_bias_in_fire_ant_supergene

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cli-boot.camp

:computer: command-line bootcamp adventure in your browser

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Bter_neonicotinoid_exposure_experiment

Caste- and pesticide-specific effects of neonicotinoid pesticide exposure on gene expression in bumblebees

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templates

Templates for applications and reports.

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msc_assemblies

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simulate_chromosome_length_evolution

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tidbits

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rubyscholar

Scrape Google Scholar Profile into a custom HTML using Ruby (Nokogiri)

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BioNano-Irys-tools

tools to work with BioNano Irys optical maps (cmaps)

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afra

Genome Annotation for the Masses

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oswitch

Provides access to complex Bioinformatics software (even BioLinux!) in just one command.

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Dockerfiles

Dockerfiles

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NpSearch

NpSearch: Search for Neuropeptides

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genevalidatorappAPI

An API for GeneValidatorApp

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QMUL-MSc-Programming-in-R-and-Using-Linux

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bibtexJournalConverter

Converts bibtex .bib journal entries from long to short journal title and vice-versa. Can also remove '.' from abbreviated journal titles.

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