Leighton Pritchard (widdowquinn)

widdowquinn

Geek Repo

Company:University of Strathclyde

Location:Glasgow, Scotland

Home Page:https://www.strath.ac.uk/staff/pritchardleightondr/

Twitter:@widdowquinn

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HuttonICS

Leighton Pritchard's repositories

Teaching

Code and files used in teaching and training courses.

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scripts

Miscellaneous scripts

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Teaching-IBioIC-Intro-to-Bioinformatics

Course materials for the IBioIC Introduction to Bioinformatics training course

KGML

Python code to parse, manipulate, download, and visualise KGML (KEGG markup language) biological pathway data.

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Notebooks-Bioinformatics

Jupyter/iPython notebooks related to bioinformatics.

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Teaching-EMBL-Plant-Path-Genomics

Presentation and example material for the EMBL Plant and Pathogen Genomics workshop, 8-11 July 2014

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Teaching-Comp-Genomics-Vis

Comparative Genomics and Visualisation teaching module

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Teaching-Intro-to-Bioinf

Introduction to Bioinformatics training course slides

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Presentation-DataVis-Barplots

A presentation on data visualisation, focusing on deficiencies of barplots.

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23andMe

Scripts/functions for working with 23andMe data

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CLIMB

Notes on CLIMB servers

notebooks

iPython notebooks, and supporting files

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pyADHoRe

Python code for handling i-ADHoRe output.

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pyrbbh

Module to find reciprocal matches/clusters of protein sequences

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THAPBI-pycits

Repository for ITS diagnostics development as part of Phytothreats project

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2016-01-11-dundee

Website for SWC built from workshop-template

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2017-01-09-dundee

Website for SWC presentation, Dundee, January 2017

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arduino-tutorial-kit

Exercises from the Arduino tutorial kit

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emacs-misc

Miscellaneous files for Emacs

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getting_started_with_D3

Working through the O'Reilly Getting Started With D3 book

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presentation-2017-10-23_JHI

Bacteriology presentation of pyani summary/roadmap

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presentation-SSCR

Temporary repo so my SSCR presentation is available

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pysge

Library to interact with the SGE/OGE job scheduler

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SI_Pritchard_etal_2015

Supplementary information/data for Pritchard et al (2015)

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SI_Whisson_et_al_2007

Additional supplementary information for the Whisson et al (2007) manuscript (doi:10.1038/nature06203)

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Teaching-SfAM-ECS

Materials for the 2017 SfAM Early Career Scientists symposium

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Teaching-Strathclyde-BM405

Teaching materials for a guest lecture at the University of Strathclyde

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THAPBI

Code related to the LWEC/Tree Health/THAPBI project

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