waldronlab / bugSigSimple

Simple exploratory analysis of curated microbe signatures

http://waldronlab.io/bugSigSimple/

waldronlab/bugSigSimple Issues

Create unit tests for functions
Updated 6 months ago6
Vignettes with errors
Updated 6 months ago4
Fix vignettes that will not knit/build
Closed 9 months ago1
getMostFrequentTaxa repetitive with bugSigDBStats package
Closed a year ago1
Conflict between BugSigDBStats::getMostFrequentTaxa() and bugSigSimple::getMostFrequentTaxa()
Updated a year ago
Update student vignettes with modern analyses
Updated 2 years ago2
replace subsetByCondition with bugsigdbr::subsetByOntology
Closed 3 years ago1
Use distance functionality from BugSigDBStats
Closed 3 years ago1
Get rid of extractBugSigs and extractSignatures
Closed 3 years ago1
Fix or remove binomial test in createTaxonTable
Closed 3 years ago
Update the vignette with title, headings, and explanatory text
Closed 4 years ago
Update vignettes/capstoneanalysis_fatima.rmd
Closed 4 years ago1
pkgdown site on gh-pages
Closed 4 years ago2
cleanup this repo's current R directory
Closed 4 years ago3
add importBugSigDB function
Closed 4 years ago1
Move Monte Carlo functionality from bugSetEnrichment
Closed 4 years ago1
cleanup vignettes/ and / directory
Closed 4 years ago1