vsbuffalo

scidataflow

Command line scientific data management tool

granges

A Rust library and command line tool for working with genomic ranges and their data.

dotfiles

My dotfiles, with simple install script.

qrqc

Quick Read Quality Control

genomap

A Rust library for storing generic genomic data by sorted chromosome name

slimflow

vincebuffalo-website

This is the source of my website

cvtk

recmap

A command line tool and Rust library for working with recombination maps.

remote_jupyter_py

Management of remote Jupyter sessions

savio-snakemake

Snakemake profile for UC Berkeley's Savio cluster

bprime

paradox_variation

remote_jupyter

Management of remote Jupyter sessions.

slirm

A fast way to launch slim jobs on slurm

coitrees

A very fast interval tree data structure

lifeweeks

A plot of your life's progress, in weeks

SLiM-Extras

Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself

dotfiles2

an entirely new dotfiles configuration

CoordinateCleaner

Automated flagging of common spatial and temporal errors in biological and palaeontological collection data, for the use in conservation, ecology and palaeontology.

cvtkpy

A Python package for calculating temporal covariance.

decode_2019_recmap_hg38

extinction_genetic_diversity

grid_df

popgen-notes

Population genetics notes

scidataflow-doc

scidataflow_manuscript

scikit-allel

A Python package for exploring and analysing genetic variation data

statsnotes

stdpopsim

A library of standard population genetic models