Parallelize plyr-dependent functions
vmikk opened this issue · comments
It should be quite easy to parallelize plyr-dependent functions to speed up processing of data.
Functions that could be modified to accept parallel option:
-
phyloseq_mult_raref
-
phyloseq_sep_tax
-
parse_silva_tax_batch
-
parse_taxonomy_amptk_batch
-
parse_amplicon_table
- just add...
as argument tosilva_tax_parse_batch
Finally, the first stepping stone!
Multiple rarefaction was parallelized with plyr (decf7ae).