vd4mmind / scRNA-seq-datasets

Raw data with annotations

scRNA-seq-datasets

Annotation files are available in this repository.

Link to raw data : click_here

Raw data with annotations

1. Blakeley: Blakeley, P.et al.Defining the three cell lineages of the human blastocyst by single-cell rna-seq.Dev.142, 3151–3165(2015).

2. Jurkat: Zheng, G. X.et al.Massively parallel digital transcriptional profiling of single-cells.Nat. communications8, 14049 (2017)

3. Kolodziejczyk: Kolodziejczyk, A. A.et al.Single-cell rna-sequencing of pluripotent states unlocks modular transcriptional variation.Cellstem cell17, 471–485 (2015).

4. Preimplantation: Yan, L.et al.Single-cell rna-seq profiling of human preimplantation embryos and embryonic stem cells.Nat. structural &molecular biology20, 1131–1139 (2013).

5. Quake: Darmanis, S.et al.A survey of human brain transcriptome diversity at the single-cell level.Proc. Natl. Acad. Sci.112,7285–7290 (2015).

6. Usoskin: Usoskin, D.et al.Unbiased classification of sensory neuron types by large-scale single-cell rna sequencing.Nat.neuroscience18, 145 (2015).

7. Zeisel: Zeisel, A.et al.Cell types in the mouse cortex and hippocampus revealed by single-cell rna-seq.Sci.347, 1138–1142(2015)