Beast code in Giters

Tyler's repositories

Accurate and robust inference of microbial growth dynamics from metagenomic sequencing

Language:PythonGPL-3.014 2 12

Compositional Lotka-Volterra

Language:PythonMIT1300

Inference of population structure from time-series genotype data

Language:C++GPL-3.013 2 10

Denoising longitudinal microbiome data.

Language:Python700

Exact p-values for Wilcoxon signed-rank test in polynomial time.

Language:Python200

Inference under a spatially-continuous coalescent model

Language:Python000

Supplementary code for experiments

Language:Shell000

Parameter estimation under a covarion nucleotide substitution model

Language:Python000

Genotype and phase short tandem repeats using Illumina whole-genome sequencing data

Language:CGPL-2.0000

Convert oriented tree format to newick

Language:Python000

zoom.plot R package

MIT000