tyang816

ShiArthur03

clash-verge-rev

Continuation of Clash Verge - A Clash Meta GUI based on Tauri (Windows, MacOS, Linux)

esm

ProtSolM

Fusion of sequence, structure and feature information to improve protein solubility prediction.

ProSST

Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.

vector-quantize-pytorch

Vector (and Scalar) Quantization, in Pytorch

faiss

A library for efficient similarity search and clustering of dense vectors.

llama3

The official Meta Llama 3 GitHub site

DeProt

Code for DeProt. A protein language model with quantizied structure and disentangled attention

DeProt

Code for DeProt. A protein language model with quantizied structure and disentangled attention

rate-my-supervisor

GeneticAlgorithmPython

Source code of PyGAD, a Python 3 library for building the genetic algorithm and training machine learning algorithms (Keras & PyTorch).

PoET

Inference code for PoET: A generative model of protein families as sequences-of-sequences

SaProt

[ICLR'24 spotlight] Saprot: Protein Language Model with Structural Alphabet

SES-Adapter

Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance.

mamba

Mamba SSM architecture

tm-vec

MMseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

clash-for-linux-backup

基于Clash Core 制作的Clash For Linux备份仓库 A Clash For Linux Backup Warehouse Based on Clash Core

RITA

RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Marks Lab at Harvard.

tree-sitter

An incremental parsing system for programming tools

PyGithub

Typed interactions with the GitHub API v3

ProtLGN

ProteinGym

Official repository for the ProteinGym benchmarks

Pro-Prime

PRIME Model (under review)

GraDe_IF

Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)

BELLE

BELLE: Be Everyone's Large Language model Engine（开源中文对话大模型）

ColabFold

Making Protein folding accessible to all!

mihomo

A simple Python Pydantic model for Honkai: Star Rail parsed data from the Mihomo API.

clash-rules

🦄️ 🎃 👻 Clash Premium 规则集(RULE-SET)，兼容 ClashX Pro、Clash for Windows 等基于 Clash Premium 内核的客户端。