hypergraph

There are 18 repositories under hypergraph topic.

• iMoonLab / HGNN

  Hypergraph Neural Networks (AAAI 2019)

  hypergraphcomplex-datahypergraph-neural-networkspytorchdeep-learning
  Language:Python 809

• pnnl / HyperNetX

  Python package for hypergraph analysis and visualization.

  hypergraphsimplicial-homologyproperty-hypergraphss-linegraphhypergraphsknowledge-graphpythonsimplicial-complexes
  Language:Python 653
• kahypar

  kahypar / kahypar

  KaHyPar (Karlsruhe Hypergraph Partitioning) is a multilevel hypergraph partitioning framework providing direct k-way and recursive bisection based partitioning algorithms that compute solutions of very high quality.

  hypergraph-partitioningalgorithm-engineeringpartitioninggraph-partitioninghypergraphpartitioning-algorithmscpppapers-with-codeevolutionary-algorithmsgraphgraph-algorithmshypergraphsgraphs
  Language:C++ 490

• easy-graph / Easy-Graph

  EasyGraph is an open-source network analysis library designed to cover advanced network processing methods. It includes functionalities for detecting structural hole spanners, network embedding, and various classic network analysis techniques.

  network-analysismultiprocessing-optimizationstructural-hole-theorypythonhypergraph
  Language:Python 456

• LHRLAB / Graph-R1

  Graph-R1: Towards Agentic GraphRAG Framework via End-to-end Reinforcement Learning

  graphragreinforcement-learninghypergraphchain-of-thought
  Language:Python 430

• jw9730 / tokengt

  [NeurIPS'22] Tokenized Graph Transformer (TokenGT), in PyTorch

  equivariancegnngraphhypergraphpytorchself-attentiontransformer
  Language:Python 342

• yamafaktory / hypergraph

  Hypergraph is data structure library to create a directed hypergraph in which a hyperedge can join any number of vertices.

  rustrust-langhypergraphhypergraphsdata-structuresdata-structuredata-sciencedatarustlang
  Language:Rust 317

• gzcsudo / Awesome-Hypergraph-Network

  A curated list of Hypergraph Learning, Hypergraph Theory, Hypergraph Dataset and Hypergraph Tool.

  graphawesome-listgraph-neural-networkhypergraphhigher-order-graphhypergraph-neural-networkhypergraph-theory
  302

• LHRLAB / HyperGraphRAG

  [NeurIPS 2025] Official resources of "HyperGraphRAG: Retrieval-Augmented Generation via Hypergraph-Structured Knowledge Representation".

  graphraghypergraphknowledge-graphlarge-language-models
  Language:Python 246
• SetReplace

  maxitg / SetReplace

  C++/Wolfram Language package for exploring set and graph rewriting systems

  graphphysicssetwolfram-languagegraph-rewritingset-substitutionwolfram-modelnkshypergraph
  Language:Mathematica 234

• malllabiisc / HyperGCN

  NeurIPS 2019: HyperGCN: A New Method of Training Graph Convolutional Networks on Hypergraphs

  graph-convolutional-networkhypergraphsemi-supervised-learning
  Language:Python 209
• mt-kahypar

  kahypar / mt-kahypar

  Mt-KaHyPar (Multi-Threaded Karlsruhe Hypergraph Partitioner) is a shared-memory multilevel graph and hypergraph partitioner equipped with parallel implementations of techniques used in the best sequential partitioning algorithms. Mt-KaHyPar can partition extremely large hypergraphs very fast and with high quality.

  hypergraph-partitioningpartitioninggraph-partitioninghypergraphsgraphsgraph-algorithmshypergraphalgorithm-engineeringpartitioning-algorithmsshared-memoryparallel-computinghigh-performance-computingtbb
  Language:C++ 165

• kaize0409 / HyperGAT_TextClassification

  Implementation of EMNLP2020 -- Be More with Less: Hypergraph Attention Networks for Inductive Text Classification

  graph-neural-networkshypergraphtext-classification
  Language:Python 113

• iMoonLab / Hyper-YOLOv1.1

  The source code of IEEE TPAMI 2025 "Hyper-YOLO: When Visual Object Detection Meets Hypergraph Computation".

  computer-visiondeep-learninghypergraphhypergraph-neural-networksobject-detectionyolo
  Language:Python 112

• yamafaktory / hypergraphz

  HypergraphZ - A Hypergraph Implementation in Zig

  graphgraph-algorithmshypergraphzigzig-libraryziglangzig-package
  Language:Zig 110

• ma-compbio / Higashi

  single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, hypergraph

  single-cellhypergraph3d-genomemachine-learning
  Language:Jupyter Notebook 91
• perfecthash

  tpn / perfecthash

  A performant, parallel, probabilistic, random acyclic-graph, low-latency, perfect hash generation library.

  perfect-hashcntwindowshypergraphperfect-hashing
  Language:C 85
• Hypergraph

  met4citizen / Hypergraph

  Hypergraph Rewriting System

  hypergraphgraph-rewriting
  Language:JavaScript 82

• FeiGSSS / Awesome-HigherOrderGraph

  Collection of papers relating data-driven higher-order graph/networks researches.

  network-sciencehigher-order-graphgraph-neural-networksgraphsimplexhypergraphnetwork-embedding
  73

• jw9730 / hot

  [NeurIPS'21] Higher-order Transformers for sets, graphs, and hypergraphs, in PyTorch

  transformergraphequivariancepytorchself-attentiongnnhypergraph
  Language:Python 68

• HeZhang1994 / hypergraph-matching

  Code of the paper "Game theoretic hypergraph matching for multi-source image correspondences". [论文代码] 超图匹配和多源图像特征点匹配。

  hypergraphhypergraph-matchinggraph-matchingimage-matching
  Language:MATLAB 54

• xuehansheng / DualHGCN

  [WWW'21] Multiplex Bipartite Network Embedding using Dual Hypergraph Convolutional Networks

  hypergraphmultiplex-networksbipartite-networkswww2021
  Language:Python 45

• iMoonLab / Hypergraph-DB

  Hypergraph Database with Hypergraph Visualization.

  hypergraphhypergraph-neural-networkshypergraphsvisualizationgraph-visualizationhypergraph-visualization
  Language:Python 42

• midas-research / sthgcn-icdm

  Code for Spatiotemporal Hypergraph Convolution Network for Stock Movement Forecasting

  spatio-temporalhypergraph
  Language:Python 42

• a-nikolaev / visualsc

  A simplicial complex and hypergraph visualization tool similar to Graphviz.

  visualizationsimplicial-complexhypergraphpdfgraphviz
  Language:OCaml 39

• iMoonLab / LLM4Hypergraph

  The source code of ICLR 2025 "Beyond Graphs: Can Large Language Models Comprehend Hypergraphs?"

  hypergraphhypergraph-neural-networksllm
  Language:Python 35

• jbpt / codebase

  The jBPT code library is a compendium of technologies that support research on design, execution, and evaluation of business processes. The library offers a broad range of basis analysis and utility functionality and, due to its open publishing model, can easily be extended.

  processpetri-netepcevent-driven-process-chainbpmnrpstrefined-process-structure-treeunfoldinguntanglinggraphhypergraphautomatonmdtreemodular-decomposition-treebehavioral-profile
  Language:Java 34

• LHRLAB / Text2NKG

  [NeurIPS 2024] Official resources of "Text2NKG: Fine-Grained N-ary Relation Extraction for N-ary relational Knowledge Graph Construction".

  hyper-relational-knowledge-graphknowledge-graph-constructionrelation-extractionfine-grainedhypergraphinformation-extraction
  Language:Python 33

• pnnl / chgl

  Chapel HyperGraph Library (CHGL) - HPC-class Hypergraphs in Chapel

  hypergraphhypergraphsdistributed-datastructurepartitioned-global-address-spacechapelgraph
  Language:Chapel 31

• jw9730 / ehnn

  [ECCV'22] Equivariant Hypergraph Neural Networks, in PyTorch

  hypergraph-matchinghypergraph-neural-networkssemi-supervised-classificationequivariancegnnhypergraphpytorch
  Language:Python 30
• widip

  colltoaction / widip

  A higher-order computing system

  yamlcategory-theoryhypergraphstring-diagramunixlanguagelispsmalltalkwiring-diagramproof-assistantmlir
  Language:Jupyter Notebook 29

• ma-compbio / MATCHA

  multiway chromatin interaction, 3D genome, single-nucleus, hypergraph representation learning

  3d-genomehypergraphmachine-learningmultiway-interactionshypergraph-learning
  Language:Python 29

• LHRLAB / DHGE

  [AAAI 2023] Official resources of "DHGE: Dual-view Hyper-Relational Knowledge Graph Embedding for Link Prediction and Entity Typing".

  hyper-relationalknowledge-graphpytorchdual-viewhypergraphtransformer
  Language:Python 25

• alex-87 / HyperGraphLib

  C++ Hypergraph modelling Library using Boost and OpenMP with some algorithms, including isomorphism using Gecode.

  algorithmhypergraphboostschool-projectlibrarycomputer-sciencehypergraphs-modelisation-librarygecodeconstraint-programmingalgorithms
  Language:C++ 24

• AndreaSimeone / d3-hypergraph

  implement hypergraphs on D3 force layout

  d3force-layoutd3v4hypergraphd3-hypergraph
  Language:JavaScript 24

• themaximalist / thinkabletype

  Knowledge Graph Toolkit

  hypergraphprogramming-languagesymbolic-programming
  Language:JavaScript 23