cellprofiler-pipeline
There are 0 repository under cellprofiler-pipeline topic.
- H2B_FUCCI2a-Nucleus-Segmentation-and-Cell-Cycle-Analysis
ajdavies73 / H2B_FUCCI2a-Nucleus-Segmentation-and-Cell-Cycle-Analysis
CellProfiler pipeline and ImageJ workflow developed for segmentation of H2B_FUCCI2a_MCF7 cell nuclei for per-nucleus and background fluorescence intensity measurement. Example workflows for downstream cell cycle analysis are also provided in this repository.
Language:R 1 - Language:Jupyter Notebook 1
Clotterdam / Laan-et-al-2023-CellProfiler
OrganelleProfiler and OrganelleContentProfiler pipelines for CellProfiler as described in Laan et al (PLoS ONE, 2023)
0Haricharan0311 / Hepatoma-Staging-Project
Scripts and figures as a part of an ongoing research initiative for Advancing Hepatocellular Carcinoma Staging and Prognosis
Language:Jupyter Notebook 0radee2k / CellProfiler-analysis-of-reproductive-stress-in-HCT116-
ImageJ macros for preparation of single images from stacks with maximum intensity projections and partially automated selection of slices in focus. CellProfiler Pipeline for yH2AX and 53BP1 counting and mitotic cells segmentation in asynchronous cultures. R scripts for processing of CellProfiler output.
Language:R 0rgomez-AI / 3DChromTrans
Measure distances between two types of markers during FISH Assay after Chromosomal Translocation event
Language:Python 0Test of Uniformity for centrosome orientation at early timepoints during Wound Healing Assay
Language:R 0
