ambermd

There are 0 repository under ambermd topic.

alanwilter / acpype
OFFICIAL: AnteChamber PYthon Parser interfacE
ambermd ambertools charmm cns gromacs python3 topologies xplor
Language:Python 172
Amber-MD / pytraj
Python interface of cpptraj
interactive-analysis molecular-dynamics visualization trajectory-analysis ambermd ambertools
Language:Jupyter Notebook 162
CyberCatQ / pyCADD
A python package for computer-aid drug design.
cadd schrodinger molecular-dynamics computer-aid-drug-design python ambermd
Language:Python 27
DashMD
cbouy / DashMD
Real time monitoring and visualization of Amber MD simulations
ambermd bokeh compchem computational-chemistry molecular-dynamics molecular-modeling ngl
Language:Python 15
GilsonLabUCSD / Sensitivity-Analysis
a force field optimization tool
ambermd
Language:C++ 3
suleymanselim / AmberTutorials
molecular-dynamics ambermd ambertools
Language:Shell 1
atn-journal / lemonpy
Tools for personal use. Feel free to use/modify.
ambermd cpptraj pmemd modeller
Language:Shell 0
hhg7 / PDB_stacker
takes a time directory of PDB files and shows stacking percentage as a function of time
amber ambermd
Language:Perl 0
juvion / AmberFF_tRNA
Amber force field parameters (based on ff99) for tRNAs
rna ambermd amber force-fields molecular-dynamics-simulation modified-residues
0
mhriitm / mhriitm.github.io
This my personal website
molecular-dynamics molecular-dynamics-simulation molecular-modeling machine-learning machinelearning-python drug-discovery drug-design drug-repurposing ambermd ambertools gromacs
Language:HTML 0
SwaroopKunapuli / SGMVMOO
Stochastic Global Multi-Variable Multi-Objective Optimization
ambermd genetic-algorithm lammps optimization-algorithms python