Anthony Azevedo's repositories
Matlab-Analysis
Code to port to different machines
FlySound
Fly sounds
dm_control
Google DeepMind's software stack for physics-based simulation and Reinforcement Learning environments, using MuJoCo.
FlyAnalysis
Analysis routines for data gathered with FlySound acquisition package
PtitPrince
python version of raincloud
Roth-Peranson
A python implementation of the nobel prize winning matching algorithm.
RainCloudPlots
Code and tutorials to visualise your data that is both beautiful *and* statistically valid
spikeDetection
Interactively detect spikes in D mel data
FANC_auto_recon
Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset
LabelSelectedFramesForDLC
Simple script to label imgXXX.png images for training sets for DLC
bmtk
Brain Modeling Toolkit
pypylon
The official python wrapper for the pylon Camera Software Suite
jsonlab
JSONLab: a native JSON/UBJSON/MassagePack encoder/decoder for MATLAB/Octave
CellSort
This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular signals from imaging data sets. A full description and validation of the method is provided in the paper, "Automated Analysis of Cellular Signals from Large-Scale Calcium Imaging Data," Neuron, 63:747 (2009): http://tinyurl.com/cellsort
DeepLabCut
Markerless tracking of user-defined features with deep learning
gvision
Video & image acquisition and experiment control for behavior neuroscience
efficient_subpixel_registration
from http://www.mathworks.com/matlabcentral/fileexchange/18401-efficient-subpixel-image-registration-by-cross-correlation
statistical-analysis-python-tutorial
Statistical Data Analysis in Python
ParametersDB
ParametersDB creates and stores a Pandas representation of the parameter database
ovation-matlab
Ovation Matlab API and utilities
FlySongSegmenter
Signal in, sine and pulse song out
dataCzar
A suite of utilities for managing lab code and data.
symphony-core
Symphony data acquisition system core libraries
Symphony-UI
MATLAB interface for the Symphony .NET framework
Acquisition
Acquisition