tleonardi

vault.sh

An interactive bash script that simplifies the management of gpg encrypted files

nanocompore

RNA modifications detection from Nanopore dRNA-Seq data

bruno

Opensource IDE For Exploring and Testing Api's (lightweight alternative to postman/insomnia)

LunarVim

🌙 LunarVim is an IDE layer for Neovim. Completely free and community driven.

small

Smallest possible syntactically valid files of different types

concurrency-limits

local-s3

An Amazon S3 service implementation based on Netty.

parasail

Pairwise Sequence Alignment Library

Complete-Striped-Smith-Waterman-Library

DNAscent

Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.

ec2-base

Gooey

Turn (almost) any Python command line program into a full GUI application with one line

broot

A new way to see and navigate directory trees : https://dystroy.org/broot

cleo

Cleo allows you to create beautiful and testable command-line interfaces.

netdata

The open-source observability platform everyone needs!

ToolsOfTheTrade

Tools of The Trade, from Hacker News.

buchhaltung

Smart tools for the ledger universe

SquiggleKit

SquiggleKit: A toolkit for manipulating nanopore signal data

wedding-program

My LaTeX-typeset wedding program

bedparse

Python module and CLI tool to perform operations on BED files

.vim

My .vim dotfiles and configurations.

nvim-ipy

IPython/Jupyter plugin for Neovim

flair

Full-Length Alternative Isoform analysis of RNA

rootstock

Clone me to create your Manubot manuscript

deep-rules

Ten Quick Tips for Deep Learning in Biology

NanoCount

EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2

filepizza

:pizza: Peer-to-peer file transfers in your browser

friedman-rafsky-test

keract

Layers Outputs and Gradients in Keras. Made easy.

STAR

RNA-seq aligner