Timo Sachsenberg's repositories
autowrap-feedstock
A conda-smithy repository for autowrap.
Awesome-Learning-with-Label-Noise
A curated list of resources for Learning with Noisy Labels
Bachelor-Thesis
My bachelor thesis on "Semi-supervised learning for nucleic acid cross-linking mass spectrometry".
bioconda-recipes
Conda recipes for the bioconda channel.
container-pwiz
The ProteoWizard Library and Tools are a set of modular and extensible open-source, cross-platform tools and software libraries that facilitate proteomics data analysis, developed by the Proteowizard Team at http://proteowizard.sourceforge.net/. This repository contains the Docker image to convert from many vendor raw data formats to mzML via Linux WINE.
containers-rules-manuscript
Recommendations to contenarized your bioinformatics software
contrib
The OpenMS contrib libraries
cpp_code_snippets
Advanced C++ By Example course. Currently in developemnt.
DiaNN
DIA-NN - a fast and easy to use tool for processing data-independent acquisition (DIA) proteomics data
dockerfiles
This repository holds Dockerfiles for creating docker images for several OpenMS configurations based on different base images.
GSoC
OBF Google Summer of Code
mzTab
mzTab Reporting MS-based Proteomics and Metabolomics Results
OpenMS
The codebase of the OpenMS project
PeptideProphetLibrary
Runs the PeptideProphet algorithm against SEQUEST _syn.txt files
proteomics-metadata-standard
The Proteomics Experimental Design file format: Standard for experimental design annotation
psi-ms-CV
HUPO-PSI mass spectrometry CV
pyopenmspandas
Improve integration of pyopenms with pandas
sl-nuxl
Streamlit repository for NuXL
Softwareprojekt_Daum_Huber_Janns
Softwareprojekt_2018
specpride
Analysis of different consensus spectrum construction methods