BioContainers

containers

Bioinformatics containers

mulled

Mulled - Automatized Containerized Software Repository

multi-package-containers

Testing building mulled containers for multi-requirement tools.

specs

BioContainers specifications

registry

Docker for Bioinformatics

workflows

Bioinformatics curated workflows that use Biocontainers tools

edu

BioContainers Documentation.

auto-mulled

Generating Docker containers from bioconda on the fly with Travis cron-job feature.

singularity-build-bot

Nightly build of Singularity containers

bioconda2biocontainer

BioContainers API client

biocontainers-backend

Python backend for Biocontainers (Flask + MongoDB)

tools-metadata

Repository to storage clean metadata of the containers in biocontainers registry

workshops

Repository for BioContainers Hackthons and Workshops

biotools-bioconda-ids

Mapping scripts between bioconda and biotools IDs

kubernetes-init

local-containers

This repository contains all the containers that can't be deploy in public registries or need customs settings

service-containers

Repository containing Services that can be deploy using Containers technologies (Docker Compose, Heml)

backup-scripts

scritps for different backups in biocontainers

bioconda-recipes

Conda recipes for the bioconda channel.

ci

Continuous integrations scripts for biocontainers

containers-ci-system

registry-backend-deprecated

registry-web-dev

BioContainers Registry UI, hosted in http://biocontainers.pro

software-archive

Binary and source code archive

tool-registry-service-schemas

APIs for discovering genomics tools, their metadata and their containers

tools

Tools used for the management of the repositories