theoryno3

deepnet

Implementation of some deep learning algorithms.

pbwt

Implementation of Positional Burrows-Wheeler Transform for genetic data

pygr-1

Python graph database framework for bioinformatics

arc2

ARC RDF Classes for PHP

bedtools

A powerful toolset for genome arithmetic.

bio2rdf-webapp

The Bio2RDF webapp, using the QueryAll Linked Data server

boto

Python interface to Amazon Web Services

congress

Public domain data collectors for the work of Congress, including legislation, amendments, and votes.

congress-legislators

Members of the United States Congress, 1789-Present, in YAML, as well as committees, presidents, and vice presidents.

cusplibrary

CUSP : A C++ Templated Sparse Matrix Library

DeepLearning

Deep Learning (Python, C/C++, Java, Scala)

gitlab-shell

Replacement for gitolite

Gource

software version control visualization

govtrack.us-web

The Django source code for the GovTrack.us website.

legal-markdown

Parse and process text-based, structured legal documents (primarily contracts, legislation, and regulation).

LodLive

browse the web of data - a SPARQL navigator

mafTools

Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.

myrna

Cloud-scale differential expression for RNA-seq

nvidia_cuda_symposium

nvidia_cuda_symposium_solutions

openacc_sample1

openacc_sample2

php-lib

A PHP utility library

rdflib-sqlalchemy

RDFLib store using SQLAlchemy dbapi as back-end

rexamples

Example R Files

rmr2

A package that allows R developer to use Hadoop MapReduce

shogun

The Shogun Machine Learning Toolbox (Source Code)

testapp

Shiny apps for testing

Theano

Optimizing GPU-meta-programming code generating array oriented optimizing math compiler in Python

VivaGraphJS

Graph drawing library for JavaScript