pmr's repositories
An-Introduction-To-Applied-Bioinformatics
Interactive lessons in bioinformatics.
bcftools
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
biopython
Official git repository for Biopython (converted from CVS)
bizhawk
Automatically exported from code.google.com/p/bizhawk
caffe
Caffe: a fast open framework for deep learning.
gatk-protected
GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only
gensim
Topic Modelling for Humans
go
The Go programming language
nr-java
Automatically exported from code.google.com/p/nr-java
opentsdb
A scalable, distributed Time Series Database.
pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
Pymol-script-repo
Collected scripts for Pymol
qiime
Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests
quickstart-map-phonegap
ArcGIS JavaScript samples for use with PhoneGap/Cordova
quickvina02
fork
rocksdb
A library that provides an embeddable, persistent key-value store for fast storage.
sambamba
Tools for working with SAM/BAM data
scikit-bio
Core objects, functions and statistics for working with biological data in Python.
scikit-learn
scikit-learn: machine learning in Python
spark-notebook
Use Apache Spark straight from the Browser
sparklingpandas
Sparkling Pandas
titan
Distributed Graph Database
yelp-api
Examples of code using our API