terhorst / momi2

Infer demographic history with the Moran model

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momi

momi (MOran Models for Inference) is a Python package that computes the expected sample frequency spectrum (SFS), a statistic commonly used in population genetics, and uses it to fit demographic history.

See the documentation for installation instructions, tutorial, and API reference.

The preprint describing the method is:

Kamm, J.A., Terhorst, J., Durbin, R, and Song, Y.S. Efficiently inferring the demographic history of many populations with allele count data. (bioRxiv)

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Infer demographic history with the Moran model

License:GNU General Public License v3.0


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