Asish Kumar Swain's starred repositories
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
ArchRtoSignac
An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)
shinylive-r
A guide for deploying Shinylive R application into Github Pages
r-shinylive-demo
Deploying an R Shiny Application in Quarto with Shinylive (No Shiny Server Required)
admultiregion_analysis
Code repository for single-cell atlas of Alzheimer's disease progression across brain regions
mergelanes
Merge fastq files split over lanes
SpatialPrompt
spatially aware scalable and accurate tool for spot deconvolution and clustering in spatial transcriptomics
ALU_IndiGen
An Indian population specific Alu insertion map
deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
liver_cancer_subtype
subtype analysis in Liver cancer using single cell transcriptomics
mkdocs-material
Documentation that simply works