supermaxiste

ARPEGGIO

A SnakeMake workflow to analyse whole genome bisulfite sequencing data from allopolyploids.

BioCypher

A unifying framework for biomedical research knowledge graphs

ARPEGGIO_paperAnalyses

All the scripts used to evaluate EAGLE_RC and run ARPEGGIO on example datasets, from the official ARPEGGIO paper

EarlyPolyploidDNAMethylation

RemappingAssemblies

We would like to improve our assemblies by mapping them to another (almost) chromosome-level assembly.

snakemake-workflow-template

A template for standard compliant snakemake-workflows

snakemake-wrappers

This is the development home of the Snakemake wrapper repository, see

SPHN_framework_testing

This repository includes the steps to complete a task related to semantization of clinical data within the SPHN framework

stefan.github.io

supermaxiste

testMemoryBug

topGO-featArabidopsis

Enrichment Analysis for Gene Ontology. This version has "enrichment_barplot" function added to the package and a change to allow printGenes to be used with ath1121501.db